- Unweighted* unweighted;
- string sumFile, distFile, unweightedFile;
- int iters;
- EstOutput userData; //unweighted score info for user tree
- EstOutput randomData; //unweighted score info for random trees
- map<float, float> validScores; //contains scores from both user and random
- map<float, float> rscoreFreq; //unweighted score, number of random trees with that score.
- map<float, float> uscoreFreq; //unweighted, number of user trees with that score.
- map<float, float> totalrscoreFreq; //unweighted score, number of random trees with that score.
- map<float, float> rCumul; //unweighted score, cumulative percentage of number of random trees with that score or higher.
- map<float, float> uCumul; //unweighted, cumulative percentage of number of user trees with that score or higher .
- map<float, float>::iterator it;
- map<float, float>::iterator it2;
+ string sumFile, allGroups;
+ vector<string> groupComb; // AB. AC, BC...
+ int iters, numGroups, numComp, counter, processors, subsampleSize, subsampleIters;
+ vector< vector<float> > utreeScores; //scores for users trees for each comb.
+ vector< vector<float> > UWScoreSig; //tree score signifigance when compared to random trees - percentage of random trees with that score or higher.
+ map<float, float> validScores; //map contains scores from random
+ vector< map<float, float> > rscoreFreq; //map <unweighted score, number of random trees with that score.> -vector entry for each combination.
+ vector< map<float, float> > rCumul; //map <unweighted score, cumulative percentage of number of random trees with that score or higher.> -vector entry for each combination.