+ for(int i=0;i<group.length();i++){
+ group[i] = toupper(group[i]);
+ if(group[i] == 'U') { group[i] = 'T'; }
+ }
+
+ if (m->debug) { m->mothurOut("[DEBUG]: reading reverse " + group + ", and group = " + temp + ".\n"); }
+
+ string reverseBarcode = reverseOligo(group); //reverse barcode