+ SystemCommand() { setParameters(); abort = true; calledHelp = true; }
+ ~SystemCommand(){}
+
+ vector<string> setParameters();
+ string getCommandName() { return "system"; }
+ string getCommandCategory() { return "General"; }
+ string getHelpString();
+ string getCitation() { return "http://www.mothur.org/wiki/System"; }
+ string getDescription() { return "execute system commands from within mothur"; }
+
+ int execute();
+ void help() { m->mothurOut(getHelpString()); }
+