- fprintf(stderr, "BAM file not properly sorted:\n");
- fprintf(stderr, "Alignment %s : %d > %d on reference (id = %d)", bAlignment.Name.c_str(),
- lastCoordinate, bAlignment.Position, bAlignment.RefID);
+ fprintf(stderr, "BamStandardIndex ERROR: file not properly sorted:\n");
+ fprintf(stderr, "Alignment %s : %d > %d on reference (id = %d)",
+ bAlignment.Name.c_str(), lastCoordinate, bAlignment.Position, bAlignment.RefID);