- const std::string& samHeader, \r
- const BamTools::RefVector& referenceSequences, \r
- bool writeUncompressed = false);\r
+ const std::string& samHeaderText,\r
+ const RefVector& referenceSequences);\r
+ // opens a BAM file for writing\r
+ bool Open(const std::string& filename,\r
+ const SamHeader& samHeader,\r
+ const RefVector& referenceSequences);\r