- // for(int i=0;i<data.size();i++){
- // if(data[i].abundance != 0){ maxRank = i; }
- // numSeqs += i*data[i].abundance;
- // numBins += data[i].abundance;
- // }
-
-};
-
-/***********************************************************************
-
-SharedSAbundVector::SharedSAbundVector(string id, vector<int> sav) : DataVector(id), data(sav) {
- try {
-
- for(int i=0;i<sav.size();i++){
- if(data[i] != 0){ maxRank = i; }
- numSeqs += i*data[i];
- numBins += data[i];
- }
- }
- catch(exception& e) {
- cout << "Standard Error: " << e.what() << " has occurred in the SharedSAbundVector class Function SharedSAbundVector. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
- exit(1);
- }
- catch(...) {
- cout << "An unknown error has occurred in the SharedSAbundVector class function SharedSAbundVector. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
- exit(1);
- }
-}
-
-/***********************************************************************
-
-SharedSAbundVector::SharedSAbundVector(ifstream& f): DataVector(), maxRank(0), numBins(0), numSeqs(0) {
- try {
- int hold;
- f >> label >> hold;
-
- data.assign(hold+1, 0);
- int inputData;
-
- for(int i=1;i<=hold;i++){
- f >> inputData;
- set(i, inputData);
- }
- }
- catch(exception& e) {
- cout << "Standard Error: " << e.what() << " has occurred in the SharedSAbundVector class Function SharedSAbundVector. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
- exit(1);
- }
- catch(...) {
- cout << "An unknown error has occurred in the SharedSAbundVector class function SharedSAbundVector. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
- exit(1);
- }