- ReadDistCommand() {}
- ~ReadDistCommand();
- vector<string> getRequiredParameters();
- vector<string> getValidParameters();
- vector<string> getRequiredFiles();
- map<string, vector<string> > getOutputFiles() { return outputTypes; }
- int execute();
- void help();
+ ReadDistCommand() { abort = true; calledHelp = true; }
+ ~ReadDistCommand() {}
+
+ vector<string> setParameters() { return outputNames; } //dummy doesn't really do anything
+ string getCommandName() { return "read.dist"; }
+ string getCommandCategory() { return "Hidden"; }
+ string getHelpString() { return "This command is no longer available. You can provide your distance files directly to the downstream commands like cluster."; }
+ string getCitation() { return "http://www.mothur.org/wiki/Read.dist"; }
+ string getDescription() { return "read.dist"; }
+
+ int execute();
+ void help() { m->mothurOut(getHelpString()); }