+ void updateForwardMap(vector<vector<int> >&, int, int, int);
+ void updateReverseMap(vector<vector<int> >&, int, int, int);
+ void setName(string n);
+ void setScores(vector<int> qs) { qScores = qs; seqLength = qScores.size(); }
+ vector<int> getScores() { return qScores; }
+