-for (int i = 0; i < bestfit.size(); i++) {
- out7 << querySeqs[i]->getName() << endl;
- out7 << querySeqs[i]->getUnaligned() << endl << endl;
-
- out7 << bestfit[i]->getName() << endl;
- out7 << bestfit[i]->getUnaligned() << endl << endl << endl;
-}
-out7.close();/*/
+//for (int i = 0; i < bestfit.size(); i++) {
+ //out7 << ">" << querySeqs[i]->getName() << "-"<< bestfit[i]->getName() << endl;
+ //out7 << bestfit[i]->getAligned() << endl;
+//}
+//out7.close();