- noOutliers = getRootName(templateFile) + "pintail.quanNOOUTLIERS";
- outliers = getRootName(templateFile) + "pintail.quanYESOUTLIERS";
+ if ((!filter) && (seqMask == "")) {
+ noOutliers = getRootName(templateFile) + "pintail.quan";
+ }else if ((filter) && (seqMask == "")) {
+ noOutliers = getRootName(templateFile) + "pintail.filtered.quan";
+ }else if ((!filter) && (seqMask != "")) {
+ noOutliers = getRootName(templateFile) + "pintail.masked.quan";
+ }else if ((filter) && (seqMask != "")) {
+ noOutliers = getRootName(templateFile) + "pintail.filtered.masked.quan";
+ }
+
+ //outliers = getRootName(templateFile) + "pintail.quanYESOUTLIERS";