@@ -114,6+114,8 @@ int PhyloSummary::addSeqToTree(string seqName, string seqTaxonomy){
//find out the sequences group
string group = groupmap->getGroup(seqName);
//find out the sequences group
string group = groupmap->getGroup(seqName);
+ if (group == "not found") { m->mothurOut(seqName + " is not in your groupfile, and will be included in the overall total, but not any group total."); m->mothurOutEndLine(); }