- string outputFile, calc, groups, line, label;
- vector<string> Estimators, Groups; //holds estimators to be used
-
+ string outputFile, calc, groups, label, outputDir;
+ vector<string> Estimators, Groups, outputNames; //holds estimators to be used
+ int process(vector<SharedRAbundVector*>, string, string);
+ int driver(vector<SharedRAbundVector*>, int, int, vector< vector<seqDist> >&);