- pDataArray->groupMap[fSeq.getName()] = thisGroup;
-
- map<string, int>::iterator it = pDataArray->groupCounts.find(thisGroup);
- if (it == pDataArray->groupCounts.end()) { pDataArray->groupCounts[thisGroup] = 1; }
- else { pDataArray->groupCounts[it->first] ++; }
+ int pos = thisGroup.find("ignore");
+ if (pos == string::npos) {
+ pDataArray->groupMap[fSeq.getName()] = thisGroup;