ReadTree* read;
TreeMap* treeMap;
GroupMap* designMap;
string treefile, sharedfile, relabundfile, groups, label, inputFileName, outputDir, designfile;
bool abort;
vector<string> outputNames, Groups;
ReadTree* read;
TreeMap* treeMap;
GroupMap* designMap;
string treefile, sharedfile, relabundfile, groups, label, inputFileName, outputDir, designfile;
bool abort;
vector<string> outputNames, Groups;