- void getSharedVectors(SharedOrderVector*);
- void setGroups();
-
- GlobalData* globaldata;
- vector<SharedSAbundVector> lookup;
- SAbundVector sabund;
- string format;
+ int sortSharedVectors(vector<SharedRAbundVector*>& );
+ int sortSharedVectors(vector<SharedRAbundFloatVector*>& );
+ int sortRabund(RAbundVector*&);
+ void printLegend(int, float);
+
+ string format, sorted, groupComb, scaler, outputDir, inputfile;
+ ofstream outsvg;
+ MothurOut* m;
+ int numOTU, fontSize;
+
+ map<int, int> orderTopGroup(vector<SharedRAbundVector*>&);
+ map<int, int> orderTopOtu(vector<SharedRAbundVector*>&);
+ map<int, int> orderShared(vector<SharedRAbundVector*>&);
+ map<int, int> orderTopGroup(vector<SharedRAbundFloatVector*>&);
+ map<int, int> orderTopOtu(vector<SharedRAbundFloatVector*>&);
+ map<int, int> orderShared(vector<SharedRAbundFloatVector*>&);