- HCluster(RAbundVector*, ListVector*);
- bool update(int, int, float);
- //string getTag();
+ HCluster(RAbundVector*, ListVector*, string, string, NameAssignment*, float);
+ ~HCluster(){};
+ double update(int, int, float);
+ void setMapWanted(bool m);
+ map<string, int> getSeqtoBin() { return seq2Bin; }
+ vector<seqDist> getSeqs();