/* This class is a representation of the groupfile. It is used by all the shared commands to determine what group a
certain sequence belongs to. */
/* This class is a representation of the groupfile. It is used by all the shared commands to determine what group a
certain sequence belongs to. */
map<string, int> groupIndex; //groupname, vectorIndex in namesOfGroups. - used by collectdisplays and libshuff commands.
int getNumSeqs() { return groupmap.size(); }
vector<string> getNamesSeqs();
map<string, int> groupIndex; //groupname, vectorIndex in namesOfGroups. - used by collectdisplays and libshuff commands.
int getNumSeqs() { return groupmap.size(); }
vector<string> getNamesSeqs();