+
+ string inputDir = cFactory->getInputDir();
+ if (inputDir != "") {
+ m->mothurOutEndLine(); m->mothurOut("Current input directory saved by mothur: " + inputDir); m->mothurOutEndLine();
+ }
+
+ string outputDir = cFactory->getOutputDir();
+ if (outputDir != "") {
+ m->mothurOutEndLine(); m->mothurOut("Current output directory saved by mothur: " + outputDir); m->mothurOutEndLine();
+ }
+ string defaultPath = m->getDefaultPath();
+ if (defaultPath != "") {
+ m->mothurOutEndLine(); m->mothurOut("Current default directory saved by mothur: " + defaultPath); m->mothurOutEndLine();
+ }
+
+
+ string temp = "./";
+#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux) || (__linux__) || (__unix__) || (__unix)
+#else
+ temp = ".\\";
+#endif
+ temp = m->getFullPathName(temp);
+ m->mothurOutEndLine(); m->mothurOut("Current working directory: " + temp); m->mothurOutEndLine();