m->mothurOut("The fasta parameter is required. You may enter several fasta files to build the filter from and filter, by separating their names with -'s.\n");
m->mothurOut("For example: fasta=abrecovery.fasta-amazon.fasta \n");
m->mothurOut("The trump parameter .... The default is ...\n");
m->mothurOut("The soft parameter .... The default is ....\n");
m->mothurOut("The hard parameter allows you to enter a file containing the filter you want to use.\n");
m->mothurOut("The vertical parameter removes columns where all sequences contain a gap character. The default is T.\n");
m->mothurOut("The fasta parameter is required. You may enter several fasta files to build the filter from and filter, by separating their names with -'s.\n");
m->mothurOut("For example: fasta=abrecovery.fasta-amazon.fasta \n");
m->mothurOut("The trump parameter .... The default is ...\n");
m->mothurOut("The soft parameter .... The default is ....\n");
m->mothurOut("The hard parameter allows you to enter a file containing the filter you want to use.\n");
m->mothurOut("The vertical parameter removes columns where all sequences contain a gap character. The default is T.\n");