+ mout->changedSeqNames = false;
+ mout->runParse = true;
+ mout->clearGroups();
+ mout->clearAllGroups();
+ mout->Treenames.clear();
+ mout->saveNextLabel = "";
+ mout->commandInputsConvertError = false;
+ mout->printedSharedHeaders = false;
+ mout->currentSharedBinLabels.clear();
+ mout->sharedBinLabelsInFile.clear();
+ mout->printedListHeaders = false;
+ mout->listBinLabelsInFile.clear();
+