+#ifndef DEUNIQUESEQSCOMMAND_H
+#define DEUNIQUESEQSCOMMAND_H
+/*
+ * deuniqueseqscommand.h
+ * Mothur
+ *
+ * Created by westcott on 10/19/10.
+ * Copyright 2010 Schloss Lab. All rights reserved.
+ *
+ */
+
+#include "command.hpp"
+
+/* This command is the reverse of unique.seqs */
+
+class DeUniqueSeqsCommand : public Command {
+
+public:
+ DeUniqueSeqsCommand(string);
+ DeUniqueSeqsCommand();
+ ~DeUniqueSeqsCommand() {}
+ vector<string> getRequiredParameters();
+ vector<string> getValidParameters();
+ vector<string> getRequiredFiles();
+ map<string, vector<string> > getOutputFiles() { return outputTypes; }
+ int execute();
+ void help();
+
+private:
+
+ string fastaFile, nameFile, outputDir;
+ vector<string> outputNames;
+ map<string, vector<string> > outputTypes;
+ bool abort;
+
+ map<string, string> nameMap;
+
+ int readNamesFile();
+
+};
+
+#endif
+