- The collect command can only be executed after a successful read.list, read.sabund or read.rabund command, with one exception.
- The collect command can be executed after a successful cluster command. It will use the .list file from the output of the cluster.
- The collect command outputs a file for each estimator you choose to use. The collect command parameters are label, line, freq, single, abund.
- No parameters are required, but you may not use both the line and label parameters at the same time.
- The collect command should be in the following format: collect(label=yourLabel, line=yourLines, freq=yourFreq, single=yourEstimators, abund=yourAbund).
- example collect(label=unique-.01-.03, line=0,5,10, freq=10, single=collect-chao-ace-jack).
+ The collect command outputs a file for each estimator you choose to use. The collect command parameters are label, freq, single, abund.
+ No parameters are required.
+ The collect command should be in the following format: collect(label=yourLabel, freq=yourFreq, single=yourEstimators, abund=yourAbund).
+ example collect(label=unique-.01-.03, freq=10, single=collect-chao-ace-jack).