+ virtual void setDistName(string s) {} //for knn, so if distance method is selected with knn you can create the smallest distance file in the right place.
protected:
map<string, string> taxonomy; //name maps to taxonomy
protected:
map<string, string> taxonomy; //name maps to taxonomy
- //map<string, int> genusCount; //maps genus to count - in essence a list of how many seqs are in each taxonomy