- if (m->inUsersGroups(itTax->first, names)) {
- phyloTree->addSeqToTree(itTax->first, itTax->second);
- tempTaxonomy[itTax->first] = itTax->second;
- }else {
- m->mothurOut("[WARNING]: " + itTax->first + " is in your taxonomy file and not in your reference file, ignoring.\n");
- }
+ //if (m->inUsersGroups(itTax->first, names)) {
+ phyloTree->addSeqToTree(itTax->first, itTax->second);
+ if (m->control_pressed) { break; }
+ //tempTaxonomy[itTax->first] = itTax->second;
+ // }else {
+ // m->mothurOut("[WARNING]: " + itTax->first + " is in your taxonomy file and not in your reference file, ignoring.\n");
+ //}