+ if (tfile == "saved") {
+ m->mothurOutEndLine(); m->mothurOut("Using probabilties from " + rdb->getSavedTaxonomy() + " that are saved in memory... "); cout.flush();;
+ wordGenusProb = rdb->wordGenusProb;
+ }else {
+ m->mothurOut("Reading template probabilities... "); cout.flush();
+ readProbFile(probFileTest, probFileTest2, probFileName, probFileName2);
+ }
+
+ //save probabilities
+ if (rdb->save) { rdb->wordGenusProb = wordGenusProb; }