void help();
private:
+ struct linePair {
+ int start;
+ int end;
+ };
+ vector<linePair> lines;
GlobalData* globaldata;
ReadOTUFile* read;
vector<Calculator*> sumCalculators;
string label, calc, groups;
vector<string> Estimators, Groups, outputNames;
vector<SharedRAbundVector*> lookup;
- string outputFileName, format, outAllFileName, outputDir;
- ofstream outputFileHandle, outAll;
- int process(vector<SharedRAbundVector*>);
+ string format, outputDir;
+ int numGroups, processors;
+ int process(vector<SharedRAbundVector*>, string, string);
+ int driver(vector<SharedRAbundVector*>, int, int, string, string);
};