initialize();
name = newName;
- for (int i = 0; i < name.length(); i++) {
- if (name[i] == ':') { name[i] = '_'; m->changedSeqNames = true; }
- }
+ m->checkName(name);
//setUnaligned removes any gap characters for us
setUnaligned(sequence);
initialize();
name = newName;
- for (int i = 0; i < name.length(); i++) {
- if (name[i] == ':') { name[i] = '_'; m->changedSeqNames = true; }
- }
+ m->checkName(name);
//setUnaligned removes any gap characters for us
setUnaligned(sequence);
name = name.substr(1);
- for (int i = 0; i < name.length(); i++) {
- if (name[i] == ':') { name[i] = '_'; m->changedSeqNames = true; }
- }
+ m->checkName(name);
}else{ m->mothurOut("Error in reading your fastafile, at position " + toString(fastaFile.tellg()) + ". Blank name."); m->mothurOutEndLine(); m->control_pressed = true; }
name = name.substr(1);
- for (int i = 0; i < name.length(); i++) {
- if (name[i] == ':') { name[i] = '_'; m->changedSeqNames = true; }
- }
+ m->checkName(name);
}else{ m->mothurOut("Error in reading your fastafile, at position " + toString(fastaFile.tellg()) + ". Blank name."); m->mothurOutEndLine(); m->control_pressed = true; }