+++ /dev/null
-#ifndef REVERSECOMMAND_H
-#define REVERSECOMMAND_H
-
-/*
- * reversecommand.h
- * Mothur
- *
- * Created by Pat Schloss on 6/6/09.
- * Copyright 2009 Patrick D. Schloss. All rights reserved.
- *
- */
-
-#include "command.hpp"
-
-class ReverseSeqsCommand : public Command {
-public:
- ReverseSeqsCommand(string);
- ReverseSeqsCommand();
- ~ReverseSeqsCommand() {}
-
- vector<string> setParameters();
- string getCommandName() { return "reverse.seqs"; }
- string getCommandCategory() { return "Sequence Processing"; }
- string getHelpString();
- string getCitation() { return "http://www.mothur.org/wiki/Reverse.seqs"; }
- string getDescription() { return "outputs a fasta file containing the reverse-complements"; }
-
-
- int execute();
- void help() { m->mothurOut(getHelpString()); }
-
-private:
-
- bool abort;
- string fastaFileName, qualFileName, outputDir;
- vector<string> outputNames;
-
-};
-
-#endif