ListVector* list;
GroupMap* groupMap;
- InputData* input;
+ CountTable ct;
ofstream out;
- string outputDir, listfile, groupfile, label;
+ string outputDir, listfile, groupfile, label, countfile;
set<string> labels;
bool abort, allLines;
vector<string> outputNames;
-
- map<string, ofstream*> filehandles;
- map<string, ofstream*>::iterator it3;
};