for (int i = 0; i < m->Treenames.size(); i++) {
nameMap.insert(m->Treenames[i]);
//sanity check - is this a group that is not in the sharedfile?
+ if (i == 0) { gps.insert("Group1"); }
if (designfile == "") {
- if (i == 0) { gps.insert("Group1"); }
if (!(m->inUsersGroups(m->Treenames[i], m->getAllGroups()))) {
m->mothurOut("[ERROR]: " + m->Treenames[i] + " is not a group in your shared or relabund file."); m->mothurOutEndLine();
mismatch = true;