globaldata = GlobalData::getInstance();
globaldata->argv = path;
- string logFileName = "mothur.logFile";
- remove(logFileName.c_str());
system("clear");
}
string options = "";
int quitCommandCalled = 0;
- mothurOut("mothur v.1.4.1");
- mothurOutEndLine();
- mothurOut("Last updated: 6/23/2009");
- mothurOutEndLine();
- mothurOutEndLine();
- mothurOut("by");
- mothurOutEndLine();
- mothurOut("Patrick D. Schloss");
- mothurOutEndLine();
- mothurOutEndLine();
- mothurOut("Department of Microbiology");
- mothurOutEndLine();
- mothurOut("pschloss@micro.umass.edu");
- mothurOutEndLine();
- mothurOut("http://schloss.micro.umass.edu/mothur");
- mothurOutEndLine();
- mothurOutEndLine();
- mothurOutEndLine();
- mothurOut("Distributed under the GNU General Public License");
- mothurOutEndLine();
- mothurOutEndLine();
- mothurOut("Type 'help()' for information on the commands that are available");
- mothurOutEndLine();
- mothurOutEndLine();
- mothurOut("Type 'quit()' to exit program");
- mothurOutEndLine();
-
+
while(quitCommandCalled != 1){
mothurOutEndLine();
openedBatch = openInputFile(batchFileName, inputBatchFile);
globaldata->argv = path;
- string logFileName = "mothur.logFile";
- remove(logFileName.c_str());
-
+
system("clear");
// char buffer = ' ';
listOfCommands = commandString.substr(1, (commandString.length()-1));
globaldata->argv = path;
- string logFileName = "mothur.logFile";
- remove(logFileName.c_str());
-
+
system("clear");
}