print_start = true;
start = time(NULL);
loops = 0;
+ double saveCutoff = cutoff;
while (matrix->getSmallDist() < cutoff && matrix->getNNodes() > 0){
if (print_start && isTrue(timing)) {
sabundFile.close();
rabundFile.close();
listFile.close();
+
+ if (saveCutoff != cutoff) { mothurOut("changed cutoff to " + toString(cutoff)); mothurOutEndLine(); }
+
//if (isTrue(timing)) {
mothurOut("It took " + toString(time(NULL) - estart) + " seconds to cluster"); mothurOutEndLine();
//}
+
+
return 0;
}
catch(exception& e) {