8 * Created by Pat Schloss on 8/13/08.
9 * Copyright 2008 Patrick D. Schloss. All rights reserved.
14 #include "listvector.hpp"
15 #include "sparsematrix.hpp"
16 #include "nameassignment.hpp"
17 #include "globaldata.hpp"
24 ReadMatrix(){ D = new SparseMatrix(); m = MothurOut::getInstance(); globaldata = GlobalData::getInstance(); }
25 virtual ~ReadMatrix() {}
26 virtual int read(NameAssignment*){ return 1; }
28 void setCutoff(float c) { cutoff = c; }
29 SparseMatrix* getMatrix() { return D; }
30 ListVector* getListVector() { return list; }
31 // OrderVector* getOrderVector() { return order; }
38 GlobalData* globaldata;