1 #ifndef PHYLODIVERSITYCOMMAND_H
2 #define PHYLODIVERSITYCOMMAND_H
5 * phylodiversitycommand.h
8 * Created by westcott on 4/30/10.
9 * Copyright 2010 Schloss Lab. All rights reserved.
13 #include "command.hpp"
15 #include "globaldata.hpp"
17 class PhyloDiversityCommand : public Command {
20 PhyloDiversityCommand(string);
21 ~PhyloDiversityCommand();
26 GlobalData* globaldata;
31 string groups, outputDir;
32 vector<string> Groups, outputNames; //holds groups to be used, and outputFile names
34 void printData(vector<int>&, vector< vector<float> >&, string);