8 * Created by westcott on 1/7/11.
9 * Copyright 2011 Schloss Lab. All rights reserved.
13 #include "mothurout.h"
19 LinearAlgebra() { m = MothurOut::getInstance(); }
22 vector<vector<double> > matrix_mult(vector<vector<double> >, vector<vector<double> >);
23 void recenter(double, vector<vector<double> >, vector<vector<double> >&);
24 int tred2(vector<vector<double> >&, vector<double>&, vector<double>&);
25 int qtli(vector<double>&, vector<double>&, vector<vector<double> >&);
26 vector< vector<double> > calculateEuclidianDistance(vector<vector<double> >&, int); //pass in axes and number of dimensions
27 vector< vector<double> > calculateEuclidianDistance(vector<vector<double> >&); //pass in axes
28 vector<vector<double> > getObservedEuclideanDistance(vector<vector<double> >&);
29 double calcPearson(vector<vector<double> >&, vector<vector<double> >&);
30 double calcSpearman(vector<vector<double> >&, vector<vector<double> >&);
31 double calcKendall(vector<vector<double> >&, vector<vector<double> >&);
36 double pythag(double, double);