7 * Created by Sarah Westcott on 1/2/09.
8 * Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
12 /* This class is designed to aid the user in running mothur. */
14 #include "command.hpp"
15 #include "commandfactory.hpp"
17 class HelpCommand : public Command {
23 vector<string> getRequiredParameters();
24 vector<string> getValidParameters();
25 vector<string> getRequiredFiles();
26 map<string, vector<string> > getOutputFiles() { return outputTypes; }
31 CommandFactory* validCommands;
32 vector<string> outputNames;
33 map<string, vector<string> > outputTypes;