1 #ifndef HEATMAPCOMMAND_H
2 #define HEATMAPCOMMAND_H
8 * Created by Sarah Westcott on 3/25/09.
9 * Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
14 #include "command.hpp"
15 #include "inputdata.h"
17 #include "sharedlistvector.h"
19 #include "rabundvector.hpp"
23 class HeatMapCommand : public Command {
26 HeatMapCommand(string);
32 GlobalData* globaldata;
35 SharedListVector* SharedList;
37 vector<SharedRAbundVector*> lookup;
41 set<int> lines; //hold lines to be used
42 set<string> labels; //holds labels to be used
43 string format, groups, sorted, scale, line, label;
44 vector<string> Groups;