2 * commandoptionparser.cpp
5 * Created by Pat Schloss on 10/23/08.
6 * Copyright 2008 Patrick D. Schloss. All rights reserved.
11 #include "globaldata.hpp"
12 #include "commandoptionparser.hpp"
15 //**********************************************************************************************************************
16 //This Function parses through the command line and pulls out the command then sends the options to the parseGlobalData
17 CommandOptionParser::CommandOptionParser(string input){
19 int openParen = input.find_first_of('(');
20 int closeParen = input.find_last_of(')');
24 if(openParen != -1 && closeParen != -1){
25 commandString = input.substr(0, openParen); //commandString contains everything before "("
26 optionString = input.substr((openParen+1), (closeParen-openParen-1)); //optionString contains everything between "(" and ")".
28 else if (openParen == -1) { mothurOut("You are missing ("); mothurOutEndLine(); }
29 else if (closeParen == -1) { mothurOut("You are missing )"); mothurOutEndLine(); }
31 //GlobalData* globaldata = GlobalData::getInstance();
32 //globaldata->parseGlobalData(commandString, optionString); //parser to separate and check options
35 errorOut(e, "CommandOptionParser", "CommandOptionParser");
40 //**********************************************************************************************************************
42 string CommandOptionParser::getCommandString() { return commandString; }
44 //**********************************************************************************************************************
46 string CommandOptionParser::getOptionString() { return optionString; }
48 //**********************************************************************************************************************