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fixed classify.seqs output file name - had issue if reference taxonomy file did not...
[mothur.git] / clearmemorycommand.h
1 #ifndef CLEARMEMORYCOMMAND_H
2 #define CLEARMEMORYCOMMAND_H
3
4 /*
5  *  clearmemorycommand.h
6  *  Mothur
7  *
8  *  Created by westcott on 7/6/11.
9  *  Copyright 2011 Schloss Lab. All rights reserved.
10  *
11  */
12
13 #include "command.hpp"
14
15 class ClearMemoryCommand : public Command {
16 public:
17         ClearMemoryCommand(string);
18         ClearMemoryCommand(){ abort = true; calledHelp = true; }
19         ~ClearMemoryCommand(){}
20         
21         vector<string> setParameters();
22         string getCommandName()                 { return "clear.memory";                        }
23         string getCommandCategory()             { return "General";     }
24         string getHelpString(); 
25         string getCitation() { return "http://www.mothur.org/wiki/Clear.memory"; }
26         string getDescription()         { return "remove saved references from memory"; }
27         
28         
29         int execute(); 
30         void help() { m->mothurOut(getHelpString()); }  
31         
32         
33 private:
34         bool abort;
35         vector<string> outputNames;
36 };
37
38 #endif
39