1 #ifndef CHIMERACOMMAND_H
2 #define CHIMERACOMMAND_H
8 * Created by Sarah Westcott on 6/29/09.
9 * Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
14 #include "command.hpp"
16 /***********************************************************/
18 class ChimeraSeqsCommand : public Command {
20 ChimeraSeqsCommand(string);
21 ChimeraSeqsCommand() {}
22 ~ChimeraSeqsCommand();
23 vector<string> getRequiredParameters();
24 vector<string> getValidParameters();
25 vector<string> getRequiredFiles();
26 map< string, vector<string> > getOutputFiles() { return outputTypes; }
32 vector<string> outputNames;
33 map< string, vector<string> > outputTypes;
37 /***********************************************************/