1 #ifndef CHIMERABELLEROPHONCOMMAND_H
2 #define CHIMERABELLEROPHONCOMMAND_H
5 * chimerabellerophoncommand.h
8 * Created by westcott on 4/1/10.
9 * Copyright 2010 Schloss Lab. All rights reserved.
14 #include "command.hpp"
18 /***********************************************************/
20 class ChimeraBellerophonCommand : public Command {
22 ChimeraBellerophonCommand(string);
23 ~ChimeraBellerophonCommand();
29 bool abort, filter, correction;
30 string fastafile, outputDir;
31 int processors, window, increment, numSeqs;
33 vector<string> outputNames;
34 vector<string> fastaFileNames;
37 /***********************************************************/