8 * Created by Sarah Westcott on 1/16/09.
9 * Copyright 2009 Schloss Lab UMASS AMherst. All rights reserved.
19 #include "utilities.hpp"
29 string getGroupName(string); //pass a sequence name get its group
30 int getGroupNumber(string); //pass a sequence name get number of sequence in its group
31 string getNames(string); //pass a sequence get the string of names in the group separated by ','s.
32 void push_back(string, string); //sequencename, groupname
34 int size(); //returns number of unique sequences
39 string groupname; //the group name for identical sequences, will be set to the first sequence found.
40 int groupnumber; //the number of sequences in that group.
41 string names; //the names of the sequence separated by ','.
44 map<string, group> data; //sequence, group
45 map<string, group>::iterator it;