]> git.donarmstrong.com Git - samtools.git/commitdiff
Should update POS on unmapped reads in 'samtools depad'
authorpeterjc <p.j.a.cock@googlemail.com>
Fri, 19 Apr 2013 15:54:14 +0000 (16:54 +0100)
committerpeterjc <p.j.a.cock@googlemail.com>
Fri, 19 Apr 2013 15:54:14 +0000 (16:54 +0100)
Previously unmapped reads with a POS entry (e.g. those reads with
a mate which was mapped) were not being updated.

This has passed my testing with some non-trivial de novo MIRA 3.9
assemblies, coupled with the new 'samtools index' BIN verification.


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