]> git.donarmstrong.com Git - samtools.git/commit
Should update POS on unmapped reads in 'samtools depad'
authorpeterjc <p.j.a.cock@googlemail.com>
Fri, 19 Apr 2013 15:54:14 +0000 (16:54 +0100)
committerpeterjc <p.j.a.cock@googlemail.com>
Fri, 19 Apr 2013 15:54:14 +0000 (16:54 +0100)
commit1278f58c316a2be359b0a48ed74c5ae22971f31c
treec6db4123eed7359abe118b71320bb5751cfff494
parentefc19a36de7236c21b3ae1fe7601e0503bc9c4b7
Should update POS on unmapped reads in 'samtools depad'

Previously unmapped reads with a POS entry (e.g. those reads with
a mate which was mapped) were not being updated.

This has passed my testing with some non-trivial de novo MIRA 3.9
assemblies, coupled with the new 'samtools index' BIN verification.
padding.c