From: Don Armstrong <don@donarmstrong.com>
Date: Wed, 5 Aug 2015 21:12:07 +0000 (-0500)
Subject: tweak why and why/not use make sections; shrink icon
X-Git-Url: https://git.donarmstrong.com/?p=using_make_for_science.git;a=commitdiff_plain;h=bc49471caf76b388c9949075085030e7ce28badc

tweak why and why/not use make sections; shrink icon
---

diff --git a/using_make_for_science.Rnw b/using_make_for_science.Rnw
index 9fd424a..12ce5e7 100644
--- a/using_make_for_science.Rnw
+++ b/using_make_for_science.Rnw
@@ -77,7 +77,7 @@
   \setbeamercolor*{fine separation line}{}
   \setbeamercovered{transparent}  
   \logo{\begin{tikzpicture}% Pale figure
-      {\node[opacity=0.7]{\IfFileExists{./logo.pdf}{\includegraphics[height=1.5cm]{logo.pdf}}{}%
+      {\node[opacity=0.7]{\IfFileExists{./logo.pdf}{\includegraphics[height=1cm,width=1cm,keepaspectratio]{logo.pdf}}{}%
         };}%
     \end{tikzpicture}}
 }
@@ -147,8 +147,8 @@
   \begin{itemize}
   \item Ubiquitous -- any machine which you can run command line tools
     on has GNU make available.
-  \item Large community -- lots of people use GNU make. It's well
-    understood and you can get questions answered
+  \item Large community -- lots of people use GNU make. It's not going
+    to go away tomorrow.
   \item Simple rules -- all of the rules are in a simple text file
     which is easily edited and version controlled
   \item Reasonable debugging -- you can see the commands that make is
@@ -421,6 +421,8 @@ $(SRX)_genes.fpkm_tracking: $(SRX)_star.bam $(BOWTIE_INDEX_DIR)$(GTF)
   \begin{itemize}
   \item Timestamps, not MD5sums
   \item Complicated workflows
+  \item Interaction of rules can be complicated to understand
+  \item Yet Another Language
   \end{itemize}
 \end{frame}