From f35c82fe2f86240080769f36952efcc5751f3290 Mon Sep 17 00:00:00 2001 From: Heng Li Date: Tue, 19 Jun 2012 12:45:47 -0400 Subject: [PATCH] fixed a couple of minor compiling warnings --- padding.c | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/padding.c b/padding.c index b7a254f..88945e2 100644 --- a/padding.c +++ b/padding.c @@ -170,7 +170,7 @@ int bam_pad2unpad(samfile_t *in, samfile_t *out, faidx_t *fai) r_tid = b->core.tid; unpad_seq(b, &r); if (h->target_len[r_tid] != r.l) { - fprintf(stderr, "[depad] ERROR: (Padded) length of '%s' is %i in BAM header, but %id in embedded reference\n", bam1_qname(b), h->target_len[r_tid], r.l); + fprintf(stderr, "[depad] ERROR: (Padded) length of '%s' is %d in BAM header, but %ld in embedded reference\n", bam1_qname(b), h->target_len[r_tid], r.l); return -1; } if (fai) { @@ -186,8 +186,8 @@ int bam_pad2unpad(samfile_t *in, samfile_t *out, faidx_t *fai) // Show gaps as ASCII 45 fprintf(stderr, "[depad] ERROR: Embedded sequence and reference FASTA don't match for %s base %i, '%c' vs '%c'\n", h->target_name[b->core.tid], i+1, - r.s[i] ? bam_nt16_rev_table[r.s[i]] : 45, - q.s[i] ? bam_nt16_rev_table[q.s[i]] : 45); + r.s[i] ? bam_nt16_rev_table[(int)r.s[i]] : 45, + q.s[i] ? bam_nt16_rev_table[(int)q.s[i]] : 45); return -1; } } -- 2.39.2