From 11b0656ab8ca22edb2fb7fb54fe761ea4c9e05e3 Mon Sep 17 00:00:00 2001
From: Heng Li <lh3@live.co.uk>
Date: Fri, 12 Jun 2009 14:43:36 +0000
Subject: [PATCH]  * samtools-0.1.4-6 (r334)  * do not export
 bam_aux_get_core() for Bio::DB::Sam because it has already    been
 implemented in that.  * this version works with the latest Bio::DB::Sam
 (20090612)

---
 bam.h     | 2 +-
 bam_aux.c | 4 ++--
 bamtk.c   | 2 +-
 3 files changed, 4 insertions(+), 4 deletions(-)

diff --git a/bam.h b/bam.h
index eb4a375..9330075 100644
--- a/bam.h
+++ b/bam.h
@@ -592,7 +592,7 @@ extern "C" {
 	void bam_parse_region(bam_header_t *header, const char *str, int *ref_id, int *begin, int *end);
 
 	void bam_aux_append(bam1_t *b, const char tag[2], char type, int len, uint8_t *data);
-	uint8_t *bam_aux_get_core(bam1_t *b, const char tag[2]); // an alias of bam_aux_get()
+	// uint8_t *bam_aux_get_core(bam1_t *b, const char tag[2]); // an alias of bam_aux_get()
 	uint8_t *bam_aux_get(bam1_t *b, const char tag[2]);
 	int32_t bam_aux2i(const uint8_t *s);
 	float bam_aux2f(const uint8_t *s);
diff --git a/bam_aux.c b/bam_aux.c
index 9869048..41be819 100644
--- a/bam_aux.c
+++ b/bam_aux.c
@@ -17,12 +17,12 @@ void bam_aux_append(bam1_t *b, const char tag[2], char type, int len, uint8_t *d
 	b->data[ori_len + 2] = type;
 	memcpy(b->data + ori_len + 3, data, len);
 }
-
+/*
 uint8_t *bam_aux_get_core(bam1_t *b, const char tag[2])
 {
 	return bam_aux_get(b, tag);
 }
-
+*/
 uint8_t *bam_aux_get(bam1_t *b, const char tag[2])
 {
 	uint8_t *s;
diff --git a/bamtk.c b/bamtk.c
index 0b95298..f762a13 100644
--- a/bamtk.c
+++ b/bamtk.c
@@ -3,7 +3,7 @@
 #include "bam.h"
 
 #ifndef PACKAGE_VERSION
-#define PACKAGE_VERSION "0.1.4-5 (r331)"
+#define PACKAGE_VERSION "0.1.4-6 (r334)"
 #endif
 
 int bam_taf2baf(int argc, char *argv[]);
-- 
2.39.2