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* remove "-f". Instead always compute consensus quality
[samtools.git] / bcftools / call1.c
2010-12-03 Heng Li * remove "-f". Instead always compute consensus quality
2010-12-02 Heng Lia possible fix to DP4=0,0,0,0; have not tested, but...
2010-11-20 Heng Li * samtools-0.1.10-9 (r844)
2010-11-16 Heng Libcftools: allow to skip indels
2010-11-16 Heng Li * samtools-0.1.9-17 (r824)
2010-11-10 Heng Libcftools: compute equal-tail (Bayesian) credible interval
2010-10-14 Heng Liimprove the LD statistics
2010-10-13 Heng Li * a minor fix to the -L option
2010-10-12 Heng Li * vcfutils.pl: fixed a typo in help message
2010-10-03 Heng Li * samtools-0.1.8-18 (r763)
2010-10-03 Heng Li * vcfutils.pl qstats: calculate marginal ts/tv
2010-09-17 Heng Li * put n_smpl to "bcf1_t" to simplify API a little
2010-09-17 Heng Lifixed a bug in indexing
2010-09-15 Heng Li * convert BCF to QCALL input
2010-09-08 Heng Li * samtools-0.1.8-13 (r715)
2010-09-03 Heng Liquite a lot changes to the contrast caller, but I still...
2010-09-03 Heng Li * changed 3.434 to 4.343 (typo!)
2010-09-02 Heng LiSNP calling from the GL field
2010-09-01 Heng LiWrite the correct ALT and PL in the SNP calling mode.
2010-08-31 Heng Lipreliminary contrast variant caller
2010-08-31 Heng Liz' and z'' can be calculated
2010-08-31 Heng Li * rename vcfout.c as call1.c