git.donarmstrong.com Git - samtools.git/history

]> git.donarmstrong.com Git - samtools.git/history - bam_md.c

2012-05-25	Petr Danecek	The -E switch to recalculate extended BAQ on the fly...	blob \| commitdiff \| raw
2011-09-02	Heng Li	* Updated samtools to the latest	blob \| commitdiff \| raw \| diff to current
2011-02-25	Heng Li	added the phase command	blob \| commitdiff \| raw \| diff to current
2011-01-27	Heng Li	* fixed a rare memory issue in bam_md.c	blob \| commitdiff \| raw \| diff to current
2011-01-15	Heng Li	move bam_nt16_nt4_table[] from bam_maqcns.c to bam_md.c	blob \| commitdiff \| raw \| diff to current
2010-12-15	Heng Li	* samtools-0.1.12-6 (r887)	blob \| commitdiff \| raw \| diff to current
2010-11-16	Heng Li	remove ZQ if both BQ and ZQ are present	blob \| commitdiff \| raw \| diff to current
2010-11-16	Heng Li	* samtools-0.1.9-18 (r825)	blob \| commitdiff \| raw \| diff to current
2010-11-15	Heng Li	* samtools-0.1.9-r823	blob \| commitdiff \| raw \| diff to current
2010-11-13	Heng Li	* samtools-0.1.9-15 (r821)	blob \| commitdiff \| raw \| diff to current
2010-11-11	Heng Li	* samtools-0.1.9-9 (r810)	blob \| commitdiff \| raw \| diff to current
2010-11-02	Heng Li	Separate kaln and kprobaln as I am preparing further...	blob \| commitdiff \| raw \| diff to current
2010-10-26	Heng Li	remove local realignment (probabilistic realignment...	blob \| commitdiff \| raw \| diff to current
2010-09-28	Heng Li	prob_realn() seems working!	blob \| commitdiff \| raw \| diff to current
2010-09-22	Heng Li	* samtools-0.1.8-15 (r379)	blob \| commitdiff \| raw \| diff to current
2010-09-16	Heng Li	* fixed a bug in capQ	blob \| commitdiff \| raw \| diff to current
2010-09-16	Heng Li	* samtools-0.1.8-14 (r727)	blob \| commitdiff \| raw \| diff to current
2010-09-16	Heng Li	* added varFilter to vcfutils.pl	blob \| commitdiff \| raw \| diff to current
2010-09-15	Heng Li	dynamic band width in realignment	blob \| commitdiff \| raw \| diff to current
2010-09-15	Heng Li	fixed a bug in realignment	blob \| commitdiff \| raw \| diff to current
2010-09-14	Heng Li	fixed a bug in realignment	blob \| commitdiff \| raw \| diff to current
2010-09-14	Heng Li	* aggressive gapped aligner is implemented in calmd.	blob \| commitdiff \| raw \| diff to current
2009-12-01	Heng Li	* samtools-0.1.7-3 (r521)	blob \| commitdiff \| raw \| diff to current
2009-09-24	Heng Li	* samtools-0.1.6-6 (r466)	blob \| commitdiff \| raw \| diff to current
2009-09-02	Heng Li	* samtools-0.1.5-34 (r451)	blob \| commitdiff \| raw \| diff to current
2009-08-29	Heng Li	* samtools-0.1.5-32 (r449)	blob \| commitdiff \| raw \| diff to current
2009-07-17	Heng Li	* samtools-0.1.5-11 (r408)	blob \| commitdiff \| raw \| diff to current
2009-07-17	Heng Li	* samtools-0.1.5-10 (r407)	blob \| commitdiff \| raw \| diff to current
2009-07-02	Heng Li	* samtools-0.1.4-21 (r368)	blob \| commitdiff \| raw \| diff to current
2009-04-25	Heng Li	* samtools-0.1.3-6 (r244)	blob \| commitdiff \| raw \| diff to current
2009-04-24	Heng Li	* samtools-0.1.3-5 (r243)	blob \| commitdiff \| raw \| diff to current
2009-04-24	Heng Li	* samtools-0.1.3-4 (r242)	blob \| commitdiff \| raw \| diff to current
2009-04-24	Heng Li	* samtools-0.1.3-3 (r240)	blob \| commitdiff \| raw \| diff to current

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