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]> git.donarmstrong.com Git - samtools.git/history - bam2bcf_indel.c

2012-09-12	Petr Danecek	Merge remote branch 'remotes/pd3/master'	blob \| commitdiff \| raw
2012-07-03	Petr Danecek	Bug fixes	blob \| commitdiff \| raw
2012-06-27	Petr Danecek	New -p switch for increased sensititivy of indel-callin...	blob \| commitdiff \| raw \| diff to current
2012-05-30	Petr Danecek	Fixed errors introduced by the 8c15f916dabce475febdf508...	blob \| commitdiff \| raw \| diff to current
2012-05-25	Petr Danecek	Fix to prevent long stretches of Ns to be mistaken...	blob \| commitdiff \| raw \| diff to current
2011-09-02	Heng Li	* Updated samtools to the latest	blob \| commitdiff \| raw \| diff to current
2011-07-07	Heng Li	Release samtools-0.1.17	blob \| commitdiff \| raw \| diff to current
2011-04-22	Heng Li	Removed the pileup command	blob \| commitdiff \| raw \| diff to current
2011-03-01	Heng Li	* optionally drop phase ambiguous reads	blob \| commitdiff \| raw \| diff to current
2011-01-27	Heng Li	* fixed a rare memory issue in bam_md.c	blob \| commitdiff \| raw \| diff to current
2010-12-14	Heng Li	(Arguably) improved the indel caller a tiny bit for...	blob \| commitdiff \| raw \| diff to current
2010-12-13	Heng Li	* samtools-0.1.12-4 (r884)	blob \| commitdiff \| raw \| diff to current
2010-12-08	Heng Li	* samtools-0.1.12-2 (r877)	blob \| commitdiff \| raw \| diff to current
2010-11-26	Heng Li	* fixed a memory violation	blob \| commitdiff \| raw \| diff to current
2010-11-19	Heng Li	* samtools-0.1.10-4 (r840)	blob \| commitdiff \| raw \| diff to current
2010-11-18	Heng Li	* samtools-0.1.10-6 (r839)	blob \| commitdiff \| raw \| diff to current
2010-11-18	Heng Li	* samtools-r836	blob \| commitdiff \| raw \| diff to current
2010-11-18	Heng Li	* samtools-0.1.10-4 (r834)	blob \| commitdiff \| raw \| diff to current
2010-11-18	Heng Li	minor change to how seqQ is applied	blob \| commitdiff \| raw \| diff to current
2010-11-18	Heng Li	* samtools-0.1.10 (r831)	blob \| commitdiff \| raw \| diff to current
2010-11-16	Heng Li	* samtools-0.1.9-18 (r825)	blob \| commitdiff \| raw \| diff to current
2010-11-15	Heng Li	* samtools-0.1.9-r823	blob \| commitdiff \| raw \| diff to current
2010-11-13	Heng Li	* samtools-0.1.9-14 (r820)	blob \| commitdiff \| raw \| diff to current
2010-11-12	Heng Li	* samtools-r818	blob \| commitdiff \| raw \| diff to current
2010-11-12	Heng Li	* samtools-0.1.19-11 (r817)	blob \| commitdiff \| raw \| diff to current
2010-11-11	Heng Li	* samtools-0.1.9-10 (r816)	blob \| commitdiff \| raw \| diff to current
2010-11-11	Heng Li	effectively revert to the viterbi version. The forward...	blob \| commitdiff \| raw \| diff to current
2010-11-11	Heng Li	* samtools-0.1.9-9 (r810)	blob \| commitdiff \| raw \| diff to current
2010-11-11	Heng Li	* prepare to replace kaln with kprobaln in realignment	blob \| commitdiff \| raw \| diff to current
2010-11-10	Heng Li	* do not use reads containing too many mismatches...	blob \| commitdiff \| raw \| diff to current
2010-11-10	Heng Li	* samtools-0.1.9-8 (r809)	blob \| commitdiff \| raw \| diff to current
2010-11-10	Heng Li	* samtools-0.1.9-8 (r807)	blob \| commitdiff \| raw \| diff to current
2010-11-09	Heng Li	* samtools-0.1.9-7 (r804)	blob \| commitdiff \| raw \| diff to current
2010-11-09	Heng Li	* samtools-0.1.9-6 (r803)	blob \| commitdiff \| raw \| diff to current
2010-11-08	Heng Li	fixed another silly bug in mpileup's indel caller	blob \| commitdiff \| raw \| diff to current
2010-11-08	Heng Li	* samtools-0.1.9-2 (r797)	blob \| commitdiff \| raw \| diff to current
2010-11-08	Heng Li	indel calling is apparently working, but more informati...	blob \| commitdiff \| raw \| diff to current
2010-11-08	Heng Li	fixed a few bugs in the indel caller. Probably there...	blob \| commitdiff \| raw \| diff to current
2010-11-08	Heng Li	prepare for the indel caller. It is not ready yet.	blob \| commitdiff \| raw \| diff to current

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